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HLA » Haplotype Frequency Search
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| Line | Haplotype | Population | Frequency (%) | Sample Size | Location |
|---|---|---|---|---|---|
| 1 | A*02-B*48-DRB1*16-DQB1*03:01 | Mexico Colima Rural | 1.14 | 43 | 19_30_N_103_37_W |
| 2 | A*02-B*48-DRB1*16-DQB1*03:01 | Mexico Oaxaca, Oaxaca city | 0.99 | 151 | 17_4_N_96_43_W |
| 3 | A*24-B*48-DRB1*16-DQB1*03:01 | Mexico Zacatecas, Fresnillo | 0.95 | 103 | 23_10_N_102_52_W |
| 4 | A*68-B*48-DRB1*16-DQB1*03:01 | Mexico Guerrero state | 0.69 | 144 | 17_36_N_99_57_W |
| 5 | A*02-B*48-DRB1*16-DQB1*03:01 | Mexico Guanajuato, Leon | 0.64 | 78 | 21_7_N_101_41_W |
| 6 | A*68-B*48-DRB1*16-DQB1*03:01 | Mexico Guanajuato, Leon | 0.64 | 78 | 21_7_N_101_41_W |
| 7 | A*02-B*48-DRB1*16-DQB1*03:01 | Mexico Mexico City East | 0.63 | 79 | 19_17_N_99_2_W |
| 8 | A*02-B*48-DRB1*16-DQB1*03:01 | Mexico Mexico City North | 0.60 | 751 | 19_29_N_99_7_W |
| 9 | A*31:01-B*48:01-DRB1*16:02-DQB1*03:01 | Mexico Veracruz Xalapa | 0.60 | 84 | 19_32_N_96_55_W |
| 10 | A*31-B*48-DRB1*16:02-DQB1*03:01 | Bolivia La Paz Aymaras | 0.58 | 87 | 16_29_S_68_7_W |
| 11 | A*68-B*48-DRB1*16:02-DQB1*03:01 | Bolivia La Paz Aymaras | 0.58 | 87 | 16_29_S_68_7_W |
| 12 | A*02-B*48-DRB1*16-DQB1*03:01 | Mexico Chihuahua Chihuahua City | 0.42 | 119 | 28_37_N_106_4_W |
| 13 | A*68-B*48-DRB1*16-DQB1*03:01 | Mexico Chiapas Rural | 0.41 | 121 | 16_47_N_92_41_W |
| 14 | A*02-B*48-DRB1*16-DQB1*03:01 | Mexico Jalisco, Guadalajara city | 0.38 | 1,189 | 20_39_N_103_20_W |
| 15 | A*02-B*48-DRB1*16-DQB1*03:01 | Mexico Michoacan, Morelia | 0.33 | 150 | 19_42_N_101_11_W |
| 16 | A*68-B*48-DRB1*16-DQB1*03:01 | Mexico Mexico City Metropolitan Area Rural | 0.33 | 150 | 19_7_N_98_45_W |
| 17 | A*24-B*48-DRB1*16-DQB1*03:01 | Mexico Mexico City Center | 0.32 | 152 | 19_25_N_99_7_W |
| 18 | A*24-B*48-DRB1*16-DQB1*03:01 | Mexico Durango, Durango city | 0.32 | 153 | 24_1_N_104_39_W |
| 19 | A*68-B*48-DRB1*16-DQB1*03:01 | Mexico Durango, Durango city | 0.32 | 153 | 24_1_N_104_39_W |
| 20 | A*02-B*48-DRB1*16-DQB1*03:01 | Mexico Puebla Rural | 0.30 | 833 | 19_57_N_97_38_W |
| 21 | A*68:01:02:02-B*48:01:01-C*08:01:01-DRB1*16:01:01-DQB1*03:01 | Russia Bashkortostan, Tatars | 0.26 | 192 | 54_13_N_56_9_E |
| 22 | A*68-B*48-DRB1*16-DQB1*03:01 | Mexico Yucatan, Merida | 0.26 | 192 | 20_58_N_89_35_W |
| 23 | A*02-B*48-DRB1*16-DQB1*03:01 | Ecuador Andes Mixed Ancestry | 0.24 | 824 | 1_28_S_78_49_W |
| 24 | A*02-B*48-DRB1*16-DQB1*03:01 | Ecuador Mixed Ancestry | 0.21 | 1,173 | 0_10_S_78_28_W |
| 25 | A*24-B*48-DRB1*16-DQB1*03:01 | Mexico Chihuahua Rural | 0.21 | 236 | 27_18_N_107_53_W |
| 26 | A*68-B*48-DRB1*16-DQB1*03:01 | Mexico Chihuahua Rural | 0.21 | 236 | 27_18_N_107_53_W |
| 27 | A*02:01-B*48:01-C*08:01-DRB1*16:02-DQB1*03:01 | USA NMDP American Indian South or Central America | 0.18 | 5,926 | 38_45_N_76_6_W |
| 28 | A*02-B*48-DRB1*16-DQB1*03:01 | Mexico Jalisco Rural | 0.17 | 585 | 20_52_N_103_50_W |
| 29 | A*68:01-B*48:01-DRB1*16:02-DQB1*03:01 | Mexico Mexico City Tlalpan | 0.15 | 330 | 19_25_N_99_8_W |
| 30 | A*24-B*48-DRB1*16-DQB1*03:01 | Mexico Michoacan Rural | 0.14 | 348 | 19_38_N_101_38_W |
| 31 | A*68-B*48-DRB1*16-DQB1*03:01 | Mexico Mexico City North | 0.13 | 751 | 19_29_N_99_7_W |
| 32 | A*24-B*48-DRB1*16-DQB1*03:01 | Ecuador Mixed Ancestry | 0.13 | 1,173 | 0_10_S_78_28_W |
| 33 | A*68-B*48-DRB1*16-DQB1*03:01 | Mexico Coahuila, Torreon | 0.13 | 396 | 25_32_N_103_24_W |
| 34 | A*24-B*48-DRB1*16-DQB1*03:01 | Ecuador Andes Mixed Ancestry | 0.12 | 824 | 1_28_S_78_49_W |
| 35 | A*02-B*48-DRB1*16-DQB1*03:01 | Mexico Tlaxcala Rural | 0.12 | 830 | 19_14_N_98_20_W |
| 36 | A*24-B*48-DRB1*16-DQB1*03:01 | Mexico Tlaxcala Rural | 0.12 | 830 | 19_14_N_98_20_W |
| 37 | A*68-B*48-DRB1*16-DQB1*03:01 | Mexico Tlaxcala Rural | 0.12 | 830 | 19_14_N_98_20_W |
| 38 | A*03-B*48-DRB1*16-DQB1*03:01 | Mexico Nuevo Leon Rural | 0.11 | 439 | 25_37_N_100_14_W |
| 39 | A*02-B*48-DRB1*16-DQB1*03:01 | Mexico Oaxaca Rural | 0.10 | 485 | 15_49_N_96_19_W |
| 40 | A*24-B*48-DRB1*16-DQB1*03:01 | Mexico Puebla, Puebla city | 0.10 | 1,994 | 19_2_N_98_12_W |
| 41 | A*31-B*48-DRB1*16-DQB1*03:01 | Mexico Veracruz Rural | 0.09 | 539 | 18_26_N_95_12_W |
| 42 | A*68-B*48-DRB1*16-DQB1*03:01 | Mexico Jalisco Rural | 0.09 | 585 | 20_52_N_103_50_W |
| 43 | A*11-B*48-DRB1*16:02-DQA1*05:05-DQB1*03:01 | Brazil Paraná Caucasian | 0.08 | 641 | 23_25_S_51_55_W |
| 44 | A*31-B*48-DRB1*16-DQB1*03:01 | Mexico Mexico City North | 0.07 | 751 | 19_29_N_99_7_W |
| 45 | A*24:03-B*48:01-C*08:01-DRB1*16:02-DQB1*03:01 | USA Hispanic pop 2 | 0.05 | 1,999 | 44_58_N_93_15_W |
| 46 | A*02-B*48-DRB1*16-DQB1*03:01 | Mexico Puebla, Puebla city | 0.03 | 1,994 | 19_2_N_98_12_W |
Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.
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